Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP6NLQ92738 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
USP6NLQ92738 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP6NLQ92738 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP6NLQ92738 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP6NLQ92738 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.32■□□□□ 0.52
USP6NLQ92738 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP6NLQ92738 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP6NLQ92738 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP6NLQ92738 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP6NLQ92738 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.32■□□□□ 0.52
USP6NLQ92738 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.32■□□□□ 0.52
USP6NLQ92738 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP6NLQ92738 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6NLQ92738 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
USP6NLQ92738 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
USP6NLQ92738 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.31■□□□□ 0.52
USP6NLQ92738 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.31■□□□□ 0.52
USP6NLQ92738 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
USP6NLQ92738 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP6NLQ92738 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6NLQ92738 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6NLQ92738 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.31■□□□□ 0.52
USP6NLQ92738 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.31■□□□□ 0.52
USP6NLQ92738 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP6NLQ92738 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP6NLQ92738 KRT43P-201ENST00000434019 910 ntBASIC18.31■□□□□ 0.52
USP6NLQ92738 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
USP6NLQ92738 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.31■□□□□ 0.52
USP6NLQ92738 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
USP6NLQ92738 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.31■□□□□ 0.52
USP6NLQ92738 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
USP6NLQ92738 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.31■□□□□ 0.52
USP6NLQ92738 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.31■□□□□ 0.52
USP6NLQ92738 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.31■□□□□ 0.52
USP6NLQ92738 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.31■□□□□ 0.52
USP6NLQ92738 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
USP6NLQ92738 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
USP6NLQ92738 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6NLQ92738 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.31■□□□□ 0.52
USP6NLQ92738 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6NLQ92738 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.31■□□□□ 0.52
USP6NLQ92738 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.31■□□□□ 0.52
USP6NLQ92738 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6NLQ92738 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6NLQ92738 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6NLQ92738 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6NLQ92738 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
USP6NLQ92738 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6NLQ92738 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
USP6NLQ92738 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
USP6NLQ92738 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
USP6NLQ92738 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP6NLQ92738 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.3■□□□□ 0.52
USP6NLQ92738 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.3■□□□□ 0.52
USP6NLQ92738 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
USP6NLQ92738 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.3■□□□□ 0.52
USP6NLQ92738 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.3■□□□□ 0.52
USP6NLQ92738 PDIA3P1-201ENST00000471856 1510 ntBASIC18.3■□□□□ 0.52
USP6NLQ92738 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6NLQ92738 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP6NLQ92738 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP6NLQ92738 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6NLQ92738 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6NLQ92738 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6NLQ92738 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.3■□□□□ 0.52
USP6NLQ92738 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.3■□□□□ 0.52
USP6NLQ92738 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.3■□□□□ 0.52
USP6NLQ92738 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.3■□□□□ 0.52
USP6NLQ92738 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
USP6NLQ92738 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
USP6NLQ92738 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.3■□□□□ 0.52
USP6NLQ92738 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.3■□□□□ 0.52
USP6NLQ92738 LINC01115-203ENST00000606068 577 ntBASIC18.3■□□□□ 0.52
USP6NLQ92738 MIR6869-201ENST00000619434 62 ntBASIC18.3■□□□□ 0.52
USP6NLQ92738 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
USP6NLQ92738 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
USP6NLQ92738 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.3■□□□□ 0.52
USP6NLQ92738 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6NLQ92738 U82695.1-201ENST00000635752 1889 ntBASIC18.3■□□□□ 0.52
USP6NLQ92738 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP6NLQ92738 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6NLQ92738 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6NLQ92738 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.3■□□□□ 0.52
USP6NLQ92738 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.3■□□□□ 0.52
USP6NLQ92738 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6NLQ92738 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.3■□□□□ 0.52
USP6NLQ92738 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.3■□□□□ 0.52
USP6NLQ92738 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6NLQ92738 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6NLQ92738 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6NLQ92738 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
USP6NLQ92738 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
USP6NLQ92738 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.29■□□□□ 0.52
USP6NLQ92738 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6NLQ92738 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
USP6NLQ92738 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6NLQ92738 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
USP6NLQ92738 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
USP6NLQ92738 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms