Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 CDK2AP2P3-201ENST00000422476 372 ntBASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 BNIP3P13-201ENST00000599968 566 ntBASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 AC005041.3-201ENST00000606287 649 ntBASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 TBC1D3J-201ENST00000620719 1426 ntBASIC6.4□□□□□ -1.39
SYNE2Q8WXH0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 TCF3P1-201ENST00000423021 1937 ntBASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 PTGER4P2-201ENST00000328411 252 ntBASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 PTGER4P3-201ENST00000458150 252 ntBASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 GGTLC4P-201ENST00000402176 664 ntBASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AC120045.2-201ENST00000567334 178 ntBASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AC091905.3-201ENST00000624959 234 ntBASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AC008536.3-201ENST00000623282 1599 ntBASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 MIR181D-201ENST00000384853 137 ntBASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 PARVG-208ENST00000466375 820 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 MEG3_2.1-201ENST00000611456 105 ntBASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AL627422.1-201ENST00000434104 580 ntBASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 STUB1-204ENST00000564370 875 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AC006116.2-201ENST00000589958 988 ntBASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 NUDT4P2-201ENST00000578341 546 ntBASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SYNE2Q8WXH0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms