Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HMGB4Q8WW32 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGB4Q8WW32 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGB4Q8WW32 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGB4Q8WW32 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGB4Q8WW32 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGB4Q8WW32 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGB4Q8WW32 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGB4Q8WW32 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 MIR1909-201ENST00000411312 80 ntBASIC16.27■□□□□ 0.2
HMGB4Q8WW32 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 AC112492.5-201ENST00000421897 457 ntBASIC16.27■□□□□ 0.2
HMGB4Q8WW32 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 ELK1P1-201ENST00000485699 580 ntBASIC16.27■□□□□ 0.2
HMGB4Q8WW32 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 CTBP2P3-201ENST00000585629 1255 ntBASIC16.27■□□□□ 0.2
HMGB4Q8WW32 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGB4Q8WW32 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGB4Q8WW32 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.27■□□□□ 0.19
HMGB4Q8WW32 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGB4Q8WW32 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HMGB4Q8WW32 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HMGB4Q8WW32 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.19
HMGB4Q8WW32 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HMGB4Q8WW32 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGB4Q8WW32 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 AC006538.1-201ENST00000567905 1585 ntBASIC16.26■□□□□ 0.19
HMGB4Q8WW32 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 AC005622.1-201ENST00000636801 1703 ntBASIC16.26■□□□□ 0.19
HMGB4Q8WW32 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 AC079776.1-201ENST00000401540 1152 ntBASIC16.26■□□□□ 0.19
HMGB4Q8WW32 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 MIR6805-201ENST00000615055 62 ntBASIC16.26■□□□□ 0.19
HMGB4Q8WW32 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.26■□□□□ 0.19
HMGB4Q8WW32 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGB4Q8WW32 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGB4Q8WW32 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGB4Q8WW32 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGB4Q8WW32 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGB4Q8WW32 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms