Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
STAG1Q8WVM7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
STAG1Q8WVM7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
STAG1Q8WVM7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
STAG1Q8WVM7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
STAG1Q8WVM7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
STAG1Q8WVM7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 AL136982.4-201ENST00000437689 1740 ntBASIC19.12■□□□□ 0.65
STAG1Q8WVM7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 TREML5P-201ENST00000421694 576 ntBASIC19.12■□□□□ 0.65
STAG1Q8WVM7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.12■□□□□ 0.65
STAG1Q8WVM7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.12■□□□□ 0.65
STAG1Q8WVM7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 AL691432.1-201ENST00000596308 1422 ntBASIC19.11■□□□□ 0.65
STAG1Q8WVM7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 HAUS4P1-201ENST00000406739 1145 ntBASIC19.11■□□□□ 0.65
STAG1Q8WVM7 BASP1P1-201ENST00000430708 665 ntBASIC19.11■□□□□ 0.65
STAG1Q8WVM7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 AC069120.2-201ENST00000524091 540 ntBASIC19.11■□□□□ 0.65
STAG1Q8WVM7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 AL158211.3-201ENST00000607385 239 ntBASIC19.11■□□□□ 0.65
STAG1Q8WVM7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.11■□□□□ 0.65
STAG1Q8WVM7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 MST1L-201ENST00000442552 2185 ntBASIC19.1■□□□□ 0.65
STAG1Q8WVM7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 AC092580.3-201ENST00000430932 139 ntBASIC19.1■□□□□ 0.65
STAG1Q8WVM7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 AC097493.3-201ENST00000509725 367 ntBASIC19.1■□□□□ 0.65
STAG1Q8WVM7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 SPDYE12P-201ENST00000618416 771 ntBASIC19.1■□□□□ 0.65
STAG1Q8WVM7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
STAG1Q8WVM7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms