Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 AC098614.1-201ENST00000368528 745 ntBASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 HLA-H-201ENST00000383620 1096 ntBASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 SPTLC1P1-201ENST00000447199 261 ntBASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 TP53TG3HP-202ENST00000569755 579 ntBASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 AC100757.3-201ENST00000622361 1406 ntBASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 RPS2P32-201ENST00000439199 892 ntBASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-3Q8TAU0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 AL391005.1-201ENST00000623953 2435 ntBASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 PCDHA1-201ENST00000378133 2726 ntBASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 AC084346.2-201ENST00000607097 949 ntBASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 AC010491.1-201ENST00000563101 2797 ntBASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX2-3Q8TAU0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
NKX2-3Q8TAU0 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.14■□□□□ 0.66
NKX2-3Q8TAU0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
NKX2-3Q8TAU0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
NKX2-3Q8TAU0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms