Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SCN4BQ8IWT1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.14■□□□□ 0.34
SCN4BQ8IWT1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SCN4BQ8IWT1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SCN4BQ8IWT1 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
SCN4BQ8IWT1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 NKILA-202ENST00000614771 2598 ntBASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 RPL37AP1-201ENST00000412502 279 ntBASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 AC026979.3-201ENST00000607315 403 ntBASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 AL133215.2-201ENST00000609242 977 ntBASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.14■□□□□ 0.33
SCN4BQ8IWT1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.13■□□□□ 0.33
SCN4BQ8IWT1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms