Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 AL355994.2-201ENST00000447882 704 ntBASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 MIR6787-201ENST00000616675 61 ntBASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 AC093525.8-201ENST00000624099 1342 ntBASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 KRT8P44-201ENST00000441609 1350 ntBASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 AL603756.1-201ENST00000606511 2163 ntBASIC15.85■□□□□ 0.13
LYSMD4Q5XG99 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 AC004987.2-201ENST00000395959 1148 ntBASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 MIR1908-201ENST00000410394 80 ntBASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 MIR6869-201ENST00000619434 62 ntBASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 GPR182-203ENST00000622922 591 ntBASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 NEFHP1-201ENST00000412845 2629 ntBASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.84■□□□□ 0.13
LYSMD4Q5XG99 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LYSMD4Q5XG99 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LYSMD4Q5XG99 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LYSMD4Q5XG99 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.83■□□□□ 0.13
LYSMD4Q5XG99 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
LYSMD4Q5XG99 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
LYSMD4Q5XG99 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LYSMD4Q5XG99 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
LYSMD4Q5XG99 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms