Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.04■□□□□ 0.32
IRX4P78413 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.04■□□□□ 0.32
IRX4P78413 AC063926.2-201ENST00000623766 1308 ntBASIC17.04■□□□□ 0.32
IRX4P78413 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.04■□□□□ 0.32
IRX4P78413 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
IRX4P78413 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.04■□□□□ 0.32
IRX4P78413 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
IRX4P78413 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 PMS2P4-201ENST00000412466 1052 ntBASIC17.04■□□□□ 0.32
IRX4P78413 AL627223.1-201ENST00000416693 442 ntBASIC17.04■□□□□ 0.32
IRX4P78413 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.04■□□□□ 0.32
IRX4P78413 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 AC067863.1-201ENST00000494933 530 ntBASIC17.04■□□□□ 0.32
IRX4P78413 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.04■□□□□ 0.32
IRX4P78413 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.04■□□□□ 0.32
IRX4P78413 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.04■□□□□ 0.32
IRX4P78413 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.04■□□□□ 0.32
IRX4P78413 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.04■□□□□ 0.32
IRX4P78413 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
IRX4P78413 AC015911.4-201ENST00000588022 1070 ntBASIC17.04■□□□□ 0.32
IRX4P78413 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.04■□□□□ 0.32
IRX4P78413 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 FRMD8P1-201ENST00000440433 1524 ntBASIC17.04■□□□□ 0.32
IRX4P78413 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.04■□□□□ 0.32
IRX4P78413 AC026691.1-201ENST00000602502 2017 ntBASIC17.04■□□□□ 0.32
IRX4P78413 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.04■□□□□ 0.32
IRX4P78413 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.04■□□□□ 0.32
IRX4P78413 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.04■□□□□ 0.32
IRX4P78413 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.04■□□□□ 0.32
IRX4P78413 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX4P78413 PAUPAR-201ENST00000630360 2965 ntBASIC17.04■□□□□ 0.32
IRX4P78413 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.04■□□□□ 0.32
IRX4P78413 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
IRX4P78413 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
IRX4P78413 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
IRX4P78413 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.03■□□□□ 0.32
IRX4P78413 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.03■□□□□ 0.32
IRX4P78413 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
IRX4P78413 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.03■□□□□ 0.32
IRX4P78413 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.03■□□□□ 0.32
IRX4P78413 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 AC009093.7-201ENST00000623853 1223 ntBASIC17.03■□□□□ 0.32
IRX4P78413 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
IRX4P78413 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.03■□□□□ 0.32
IRX4P78413 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
IRX4P78413 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IRX4P78413 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.03■□□□□ 0.32
IRX4P78413 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.02■□□□□ 0.32
IRX4P78413 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
IRX4P78413 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IRX4P78413 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
IRX4P78413 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
IRX4P78413 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IRX4P78413 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
IRX4P78413 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
IRX4P78413 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IRX4P78413 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.02■□□□□ 0.32
IRX4P78413 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
IRX4P78413 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.02■□□□□ 0.32
IRX4P78413 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
IRX4P78413 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IRX4P78413 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
IRX4P78413 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
IRX4P78413 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IRX4P78413 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
IRX4P78413 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IRX4P78413 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IRX4P78413 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms