Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.58□□□□□ -0.55
RPL39P62891 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.58□□□□□ -0.55
RPL39P62891 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
RPL39P62891 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
RPL39P62891 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC11.58□□□□□ -0.56
RPL39P62891 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
RPL39P62891 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC11.58□□□□□ -0.56
RPL39P62891 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.58□□□□□ -0.56
RPL39P62891 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.58□□□□□ -0.56
RPL39P62891 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
RPL39P62891 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.58□□□□□ -0.56
RPL39P62891 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.58□□□□□ -0.56
RPL39P62891 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.58□□□□□ -0.56
RPL39P62891 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC11.58□□□□□ -0.56
RPL39P62891 BNIP3P18-201ENST00000593976 575 ntBASIC11.58□□□□□ -0.56
RPL39P62891 AL353135.1-201ENST00000606729 504 ntBASIC11.58□□□□□ -0.56
RPL39P62891 AC010654.1-201ENST00000615722 808 ntBASIC11.58□□□□□ -0.56
RPL39P62891 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC11.58□□□□□ -0.56
RPL39P62891 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.58□□□□□ -0.56
RPL39P62891 SNX18-202ENST00000343017 3140 ntBASIC11.58□□□□□ -0.56
RPL39P62891 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC11.58□□□□□ -0.56
RPL39P62891 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.58□□□□□ -0.56
RPL39P62891 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 DKFZP434H168-201ENST00000567381 1905 ntBASIC11.58□□□□□ -0.56
RPL39P62891 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 AC006486.2-201ENST00000624246 2199 ntBASIC11.58□□□□□ -0.56
RPL39P62891 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
RPL39P62891 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 AC097376.2-205ENST00000610159 5334 ntBASIC11.58□□□□□ -0.56
RPL39P62891 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.58□□□□□ -0.56
RPL39P62891 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
RPL39P62891 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RPL39P62891 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
RPL39P62891 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
RPL39P62891 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
RPL39P62891 AC131009.4-201ENST00000624048 1740 ntBASIC11.57□□□□□ -0.56
RPL39P62891 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.57□□□□□ -0.56
RPL39P62891 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.57□□□□□ -0.56
RPL39P62891 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
RPL39P62891 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 AC233702.3-201ENST00000578656 1387 ntBASIC11.57□□□□□ -0.56
RPL39P62891 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
RPL39P62891 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
RPL39P62891 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.57□□□□□ -0.56
RPL39P62891 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
RPL39P62891 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.57□□□□□ -0.56
RPL39P62891 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.57□□□□□ -0.56
RPL39P62891 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.57□□□□□ -0.56
RPL39P62891 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.57□□□□□ -0.56
RPL39P62891 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 CHCHD2P8-201ENST00000429873 447 ntBASIC11.57□□□□□ -0.56
RPL39P62891 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.57□□□□□ -0.56
RPL39P62891 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.57□□□□□ -0.56
RPL39P62891 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
RPL39P62891 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.57□□□□□ -0.56
RPL39P62891 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
RPL39P62891 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC11.57□□□□□ -0.56
RPL39P62891 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.57□□□□□ -0.56
RPL39P62891 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.57□□□□□ -0.56
RPL39P62891 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.57□□□□□ -0.56
RPL39P62891 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC11.57□□□□□ -0.56
RPL39P62891 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms