Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO4P61968 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LMO4P61968 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO4P61968 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO4P61968 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO4P61968 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.28□□□□□ -0.28
LMO4P61968 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO4P61968 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LMO4P61968 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO4P61968 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO4P61968 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LMO4P61968 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO4P61968 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO4P61968 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO4P61968 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
LMO4P61968 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
LMO4P61968 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LMO4P61968 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO4P61968 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.28□□□□□ -0.28
LMO4P61968 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO4P61968 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
LMO4P61968 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
LMO4P61968 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.28□□□□□ -0.28
LMO4P61968 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.28□□□□□ -0.28
LMO4P61968 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.28□□□□□ -0.28
LMO4P61968 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
LMO4P61968 WASH4P-201ENST00000564273 1246 ntBASIC13.28□□□□□ -0.28
LMO4P61968 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.28□□□□□ -0.28
LMO4P61968 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.28□□□□□ -0.28
LMO4P61968 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO4P61968 ALOX12P2-203ENST00000570921 1945 ntBASIC13.28□□□□□ -0.28
LMO4P61968 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
LMO4P61968 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LMO4P61968 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.28□□□□□ -0.28
LMO4P61968 KRT8P37-201ENST00000451609 1420 ntBASIC13.28□□□□□ -0.28
LMO4P61968 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO4P61968 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LMO4P61968 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO4P61968 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO4P61968 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.28□□□□□ -0.28
LMO4P61968 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.28□□□□□ -0.28
LMO4P61968 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO4P61968 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LMO4P61968 Z97205.2-201ENST00000564697 1639 ntBASIC13.28□□□□□ -0.28
LMO4P61968 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO4P61968 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LMO4P61968 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LMO4P61968 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LMO4P61968 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LMO4P61968 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LMO4P61968 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LMO4P61968 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
LMO4P61968 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LMO4P61968 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.27□□□□□ -0.28
LMO4P61968 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LMO4P61968 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.27□□□□□ -0.28
LMO4P61968 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
LMO4P61968 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.27□□□□□ -0.28
LMO4P61968 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
LMO4P61968 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LMO4P61968 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LMO4P61968 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LMO4P61968 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
LMO4P61968 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
LMO4P61968 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LMO4P61968 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO4P61968 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO4P61968 AZGP1P1-201ENST00000411909 902 ntBASIC13.27□□□□□ -0.29
LMO4P61968 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.27□□□□□ -0.29
LMO4P61968 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LMO4P61968 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.27□□□□□ -0.29
LMO4P61968 MYCLP2-201ENST00000449268 967 ntBASIC13.27□□□□□ -0.29
LMO4P61968 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.27□□□□□ -0.29
LMO4P61968 RN7SL752P-201ENST00000463779 287 ntBASIC13.27□□□□□ -0.29
LMO4P61968 MEIS3P1-201ENST00000495167 958 ntBASIC13.27□□□□□ -0.29
LMO4P61968 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LMO4P61968 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.27□□□□□ -0.29
LMO4P61968 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.27□□□□□ -0.29
LMO4P61968 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.27□□□□□ -0.29
LMO4P61968 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.27□□□□□ -0.29
LMO4P61968 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LMO4P61968 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.27□□□□□ -0.29
LMO4P61968 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LMO4P61968 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LMO4P61968 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.27□□□□□ -0.29
LMO4P61968 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.27□□□□□ -0.29
LMO4P61968 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.27□□□□□ -0.29
LMO4P61968 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.27□□□□□ -0.29
LMO4P61968 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
LMO4P61968 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO4P61968 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO4P61968 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LMO4P61968 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LMO4P61968 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO4P61968 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO4P61968 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
LMO4P61968 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.27□□□□□ -0.29
LMO4P61968 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO4P61968 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LMO4P61968 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms