Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.62■□□□□ 0.09
VSX2P58304 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.62■□□□□ 0.09
VSX2P58304 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.62■□□□□ 0.09
VSX2P58304 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.62■□□□□ 0.09
VSX2P58304 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
VSX2P58304 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
VSX2P58304 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
VSX2P58304 SPDYE7P-202ENST00000420373 878 ntBASIC15.62■□□□□ 0.09
VSX2P58304 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.62■□□□□ 0.09
VSX2P58304 CNN2P2-201ENST00000443536 909 ntBASIC15.62■□□□□ 0.09
VSX2P58304 CNN2P3-201ENST00000450201 906 ntBASIC15.62■□□□□ 0.09
VSX2P58304 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.62■□□□□ 0.09
VSX2P58304 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.62■□□□□ 0.09
VSX2P58304 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.62■□□□□ 0.09
VSX2P58304 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.62■□□□□ 0.09
VSX2P58304 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.62■□□□□ 0.09
VSX2P58304 AL136317.3-201ENST00000618497 906 ntBASIC15.62■□□□□ 0.09
VSX2P58304 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.62■□□□□ 0.09
VSX2P58304 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
VSX2P58304 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.62■□□□□ 0.09
VSX2P58304 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
VSX2P58304 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 AL589702.1-201ENST00000641229 1509 ntBASIC15.62■□□□□ 0.09
VSX2P58304 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.62■□□□□ 0.09
VSX2P58304 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.62■□□□□ 0.09
VSX2P58304 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
VSX2P58304 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.61■□□□□ 0.09
VSX2P58304 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
VSX2P58304 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.61■□□□□ 0.09
VSX2P58304 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.61■□□□□ 0.09
VSX2P58304 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.61■□□□□ 0.09
VSX2P58304 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.61■□□□□ 0.09
VSX2P58304 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.61■□□□□ 0.09
VSX2P58304 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 AC003101.2-201ENST00000612557 442 ntBASIC15.61■□□□□ 0.09
VSX2P58304 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
VSX2P58304 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.61■□□□□ 0.09
VSX2P58304 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VSX2P58304 PCDHB19P-201ENST00000570871 2371 ntBASIC15.61■□□□□ 0.09
VSX2P58304 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
VSX2P58304 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
VSX2P58304 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.6■□□□□ 0.09
VSX2P58304 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VSX2P58304 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VSX2P58304 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VSX2P58304 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.6■□□□□ 0.09
VSX2P58304 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
VSX2P58304 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VSX2P58304 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.6■□□□□ 0.09
VSX2P58304 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.6■□□□□ 0.09
VSX2P58304 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.6■□□□□ 0.09
VSX2P58304 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.6■□□□□ 0.09
VSX2P58304 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.6■□□□□ 0.09
VSX2P58304 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VSX2P58304 FAM220BP-201ENST00000377689 816 ntBASIC15.6■□□□□ 0.09
VSX2P58304 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms