Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC044849.1-201ENST00000519737 1188 ntBASIC17.94■□□□□ 0.46
HTTP42858 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.94■□□□□ 0.46
HTTP42858 AC079336.7-201ENST00000623428 1078 ntBASIC17.94■□□□□ 0.46
HTTP42858 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.93■□□□□ 0.46
HTTP42858 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
HTTP42858 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HTTP42858 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HTTP42858 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HTTP42858 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HTTP42858 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HTTP42858 C2orf27AP3-201ENST00000434123 579 ntBASIC17.93■□□□□ 0.46
HTTP42858 AC069218.1-201ENST00000435269 762 ntBASIC17.93■□□□□ 0.46
HTTP42858 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.93■□□□□ 0.46
HTTP42858 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.93■□□□□ 0.46
HTTP42858 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HTTP42858 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.93■□□□□ 0.46
HTTP42858 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HTTP42858 AL354718.3-201ENST00000616414 581 ntBASIC17.93■□□□□ 0.46
HTTP42858 CR382287.1-201ENST00000623954 586 ntBASIC17.93■□□□□ 0.46
HTTP42858 AL139011.1-202ENST00000642063 584 ntBASIC17.93■□□□□ 0.46
HTTP42858 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
HTTP42858 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HTTP42858 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HTTP42858 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.93■□□□□ 0.46
HTTP42858 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HTTP42858 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HTTP42858 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.93■□□□□ 0.46
HTTP42858 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HTTP42858 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HTTP42858 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HTTP42858 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.93■□□□□ 0.46
HTTP42858 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HTTP42858 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.92■□□□□ 0.46
HTTP42858 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.92■□□□□ 0.46
HTTP42858 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.92■□□□□ 0.46
HTTP42858 KRT18P64-201ENST00000434946 1219 ntBASIC17.92■□□□□ 0.46
HTTP42858 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HTTP42858 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.92■□□□□ 0.46
HTTP42858 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HTTP42858 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 AL645939.5-201ENST00000606834 243 ntBASIC17.92■□□□□ 0.46
HTTP42858 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 AC018892.3-201ENST00000623986 2499 ntBASIC17.92■□□□□ 0.46
HTTP42858 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.92■□□□□ 0.46
HTTP42858 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.92■□□□□ 0.46
HTTP42858 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.92■□□□□ 0.46
HTTP42858 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.92■□□□□ 0.46
HTTP42858 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.92■□□□□ 0.46
HTTP42858 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HTTP42858 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.92■□□□□ 0.46
HTTP42858 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.92■□□□□ 0.46
HTTP42858 AC114501.1-201ENST00000445949 172 ntBASIC17.92■□□□□ 0.46
HTTP42858 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.92■□□□□ 0.46
HTTP42858 AC138649.2-201ENST00000615886 705 ntBASIC17.92■□□□□ 0.46
HTTP42858 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HTTP42858 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.92■□□□□ 0.46
HTTP42858 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HTTP42858 AC008764.6-201ENST00000595909 2069 ntBASIC17.92■□□□□ 0.46
HTTP42858 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HTTP42858 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
HTTP42858 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.92■□□□□ 0.46
HTTP42858 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.92■□□□□ 0.46
HTTP42858 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.92■□□□□ 0.46
HTTP42858 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.92■□□□□ 0.46
HTTP42858 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HTTP42858 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HTTP42858 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HTTP42858 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HTTP42858 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HTTP42858 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HTTP42858 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.91■□□□□ 0.46
HTTP42858 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.91■□□□□ 0.46
HTTP42858 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HTTP42858 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HTTP42858 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.91■□□□□ 0.46
HTTP42858 MIR3907-201ENST00000579424 151 ntBASIC17.91■□□□□ 0.46
HTTP42858 AP000346.4-201ENST00000614827 381 ntBASIC17.91■□□□□ 0.46
HTTP42858 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HTTP42858 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HTTP42858 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HTTP42858 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HTTP42858 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HTTP42858 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms