Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 YBX1P5-201ENST00000509441 847 ntBASIC16.46■□□□□ 0.23
HLA-DPA1P20036 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DPA1P20036 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
HLA-DPA1P20036 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DPA1P20036 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DPA1P20036 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DPA1P20036 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DPA1P20036 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DPA1P20036 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 AC245100.5-201ENST00000452108 331 ntBASIC16.45■□□□□ 0.22
HLA-DPA1P20036 TIMM8BP1-201ENST00000452384 211 ntBASIC16.45■□□□□ 0.22
HLA-DPA1P20036 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 AC098859.1-201ENST00000502915 1238 ntBASIC16.45■□□□□ 0.22
HLA-DPA1P20036 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 AC079140.1-201ENST00000508039 487 ntBASIC16.45■□□□□ 0.22
HLA-DPA1P20036 KRT8P48-201ENST00000515599 1220 ntBASIC16.45■□□□□ 0.22
HLA-DPA1P20036 KRT8P23-201ENST00000560090 1207 ntBASIC16.45■□□□□ 0.22
HLA-DPA1P20036 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 MIR3687-2-201ENST00000577708 61 ntBASIC16.45■□□□□ 0.22
HLA-DPA1P20036 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 MIR3687-1-201ENST00000614492 61 ntBASIC16.45■□□□□ 0.22
HLA-DPA1P20036 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPA1P20036 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms