Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.01■□□□□ 0.31
PSMC3P17980 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.01■□□□□ 0.31
PSMC3P17980 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.01■□□□□ 0.31
PSMC3P17980 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 KRT17P7-201ENST00000451704 1104 ntBASIC17.01■□□□□ 0.31
PSMC3P17980 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.01■□□□□ 0.31
PSMC3P17980 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 AL008721.1-201ENST00000609964 604 ntBASIC17.01■□□□□ 0.31
PSMC3P17980 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.01■□□□□ 0.31
PSMC3P17980 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.01■□□□□ 0.31
PSMC3P17980 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.01■□□□□ 0.31
PSMC3P17980 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PSMC3P17980 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.01■□□□□ 0.31
PSMC3P17980 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.01■□□□□ 0.31
PSMC3P17980 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PSMC3P17980 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.01■□□□□ 0.31
PSMC3P17980 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PSMC3P17980 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
PSMC3P17980 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PSMC3P17980 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17■□□□□ 0.31
PSMC3P17980 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PSMC3P17980 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PSMC3P17980 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17■□□□□ 0.31
PSMC3P17980 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PSMC3P17980 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
PSMC3P17980 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17■□□□□ 0.31
PSMC3P17980 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17■□□□□ 0.31
PSMC3P17980 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PSMC3P17980 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PSMC3P17980 DOC2GP-204ENST00000639052 2548 ntBASIC17■□□□□ 0.31
PSMC3P17980 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17■□□□□ 0.31
PSMC3P17980 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17■□□□□ 0.31
PSMC3P17980 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17■□□□□ 0.31
PSMC3P17980 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17■□□□□ 0.31
PSMC3P17980 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17■□□□□ 0.31
PSMC3P17980 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 AL353779.1-201ENST00000434793 351 ntBASIC17■□□□□ 0.31
PSMC3P17980 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17■□□□□ 0.31
PSMC3P17980 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17■□□□□ 0.31
PSMC3P17980 MEIS3P1-201ENST00000495167 958 ntBASIC17■□□□□ 0.31
PSMC3P17980 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17■□□□□ 0.31
PSMC3P17980 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17■□□□□ 0.31
PSMC3P17980 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17■□□□□ 0.31
PSMC3P17980 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17■□□□□ 0.31
PSMC3P17980 TP53TG3HP-202ENST00000569755 579 ntBASIC17■□□□□ 0.31
PSMC3P17980 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PSMC3P17980 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17■□□□□ 0.31
PSMC3P17980 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PSMC3P17980 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PSMC3P17980 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
PSMC3P17980 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PSMC3P17980 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 AC105020.1-201ENST00000435356 2205 ntBASIC17■□□□□ 0.31
PSMC3P17980 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17■□□□□ 0.31
PSMC3P17980 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PSMC3P17980 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PSMC3P17980 AC007541.1-201ENST00000570282 1469 ntBASIC16.99■□□□□ 0.31
PSMC3P17980 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PSMC3P17980 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PSMC3P17980 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PSMC3P17980 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms