Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.59□□□□□ -0.23
CTSDP07339 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.59□□□□□ -0.23
CTSDP07339 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.59□□□□□ -0.23
CTSDP07339 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CTSDP07339 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CTSDP07339 AC092329.2-201ENST00000598402 547 ntBASIC13.59□□□□□ -0.23
CTSDP07339 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.59□□□□□ -0.23
CTSDP07339 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.59□□□□□ -0.23
CTSDP07339 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 AP002414.2-201ENST00000591780 3365 ntBASIC13.59□□□□□ -0.23
CTSDP07339 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.59□□□□□ -0.23
CTSDP07339 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.59□□□□□ -0.23
CTSDP07339 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CTSDP07339 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.59□□□□□ -0.23
CTSDP07339 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.59□□□□□ -0.23
CTSDP07339 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.59□□□□□ -0.23
CTSDP07339 U82695.1-201ENST00000635752 1889 ntBASIC13.59□□□□□ -0.23
CTSDP07339 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSDP07339 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CTSDP07339 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CTSDP07339 IER3-202ENST00000376377 1350 ntBASIC13.58□□□□□ -0.23
CTSDP07339 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CTSDP07339 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CTSDP07339 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
CTSDP07339 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CTSDP07339 AP005117.1-201ENST00000584346 1413 ntBASIC13.58□□□□□ -0.24
CTSDP07339 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.58□□□□□ -0.24
CTSDP07339 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CTSDP07339 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CTSDP07339 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CTSDP07339 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.58□□□□□ -0.24
CTSDP07339 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CTSDP07339 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CTSDP07339 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CTSDP07339 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.58□□□□□ -0.24
CTSDP07339 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CTSDP07339 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CTSDP07339 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CTSDP07339 HCG4-201ENST00000418983 998 ntBASIC13.58□□□□□ -0.24
CTSDP07339 LINC00265-3P-201ENST00000447588 903 ntBASIC13.58□□□□□ -0.24
CTSDP07339 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.58□□□□□ -0.24
CTSDP07339 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.58□□□□□ -0.24
CTSDP07339 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.58□□□□□ -0.24
CTSDP07339 AC074051.2-201ENST00000565115 352 ntBASIC13.58□□□□□ -0.24
CTSDP07339 MIR5100-201ENST00000579544 119 ntBASIC13.58□□□□□ -0.24
CTSDP07339 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CTSDP07339 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CTSDP07339 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.58□□□□□ -0.24
CTSDP07339 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.58□□□□□ -0.24
CTSDP07339 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CTSDP07339 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CTSDP07339 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.58□□□□□ -0.24
CTSDP07339 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CTSDP07339 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CTSDP07339 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.58□□□□□ -0.24
CTSDP07339 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CTSDP07339 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CTSDP07339 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CTSDP07339 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.58□□□□□ -0.24
CTSDP07339 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CTSDP07339 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.58□□□□□ -0.24
CTSDP07339 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 AC087481.3-201ENST00000602886 1894 ntBASIC13.57□□□□□ -0.24
CTSDP07339 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.57□□□□□ -0.24
CTSDP07339 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.57□□□□□ -0.24
CTSDP07339 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.57□□□□□ -0.24
CTSDP07339 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.57□□□□□ -0.24
CTSDP07339 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.57□□□□□ -0.24
CTSDP07339 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.57□□□□□ -0.24
CTSDP07339 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.57□□□□□ -0.24
CTSDP07339 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.57□□□□□ -0.24
CTSDP07339 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.57□□□□□ -0.24
CTSDP07339 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.57□□□□□ -0.24
CTSDP07339 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.57□□□□□ -0.24
CTSDP07339 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.57□□□□□ -0.24
CTSDP07339 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.57□□□□□ -0.24
CTSDP07339 AC005412.3-201ENST00000580309 715 ntBASIC13.57□□□□□ -0.24
CTSDP07339 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.57□□□□□ -0.24
CTSDP07339 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms