Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.83□□□□□ -0.04
HMGN1P05114 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.83□□□□□ -0.04
HMGN1P05114 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGN1P05114 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.83□□□□□ -0.04
HMGN1P05114 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGN1P05114 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGN1P05114 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGN1P05114 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGN1P05114 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
HMGN1P05114 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HMGN1P05114 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGN1P05114 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGN1P05114 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGN1P05114 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HMGN1P05114 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGN1P05114 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGN1P05114 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HMGN1P05114 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HMGN1P05114 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGN1P05114 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
HMGN1P05114 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
HMGN1P05114 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGN1P05114 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGN1P05114 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGN1P05114 AC016027.1-202ENST00000607927 1699 ntBASIC14.82□□□□□ -0.04
HMGN1P05114 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HMGN1P05114 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGN1P05114 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGN1P05114 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGN1P05114 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGN1P05114 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.82□□□□□ -0.04
HMGN1P05114 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGN1P05114 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGN1P05114 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.82□□□□□ -0.04
HMGN1P05114 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.82□□□□□ -0.04
HMGN1P05114 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGN1P05114 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGN1P05114 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGN1P05114 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGN1P05114 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGN1P05114 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGN1P05114 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGN1P05114 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.82□□□□□ -0.04
HMGN1P05114 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGN1P05114 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGN1P05114 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGN1P05114 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGN1P05114 LINC02228-204ENST00000642115 2962 ntBASIC14.82□□□□□ -0.04
HMGN1P05114 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HMGN1P05114 AC012569.1-201ENST00000591191 1524 ntBASIC14.82□□□□□ -0.04
HMGN1P05114 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
HMGN1P05114 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGN1P05114 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGN1P05114 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGN1P05114 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGN1P05114 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
HMGN1P05114 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGN1P05114 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HMGN1P05114 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGN1P05114 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGN1P05114 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGN1P05114 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGN1P05114 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGN1P05114 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGN1P05114 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGN1P05114 AL160237.2-201ENST00000556165 472 ntBASIC14.81□□□□□ -0.04
HMGN1P05114 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGN1P05114 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGN1P05114 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HMGN1P05114 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HMGN1P05114 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGN1P05114 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGN1P05114 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HMGN1P05114 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HMGN1P05114 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMGN1P05114 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HMGN1P05114 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms