Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3O95983 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.73■□□□□ 0.59
MBD3O95983 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.73■□□□□ 0.59
MBD3O95983 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.73■□□□□ 0.59
MBD3O95983 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.73■□□□□ 0.59
MBD3O95983 AC074051.2-201ENST00000565115 352 ntBASIC18.73■□□□□ 0.59
MBD3O95983 MIR5100-201ENST00000579544 119 ntBASIC18.73■□□□□ 0.59
MBD3O95983 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
MBD3O95983 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MBD3O95983 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.73■□□□□ 0.59
MBD3O95983 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3O95983 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3O95983 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3O95983 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
MBD3O95983 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3O95983 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MBD3O95983 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
MBD3O95983 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3O95983 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD3O95983 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3O95983 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD3O95983 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
MBD3O95983 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.72■□□□□ 0.59
MBD3O95983 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 PI4KAP1-204ENST00000612579 1703 ntBASIC18.72■□□□□ 0.59
MBD3O95983 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
MBD3O95983 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 LINC01101-201ENST00000622953 1884 ntBASIC18.72■□□□□ 0.59
MBD3O95983 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.72■□□□□ 0.59
MBD3O95983 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 LINC00265-3P-201ENST00000447588 903 ntBASIC18.72■□□□□ 0.59
MBD3O95983 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.72■□□□□ 0.59
MBD3O95983 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.72■□□□□ 0.59
MBD3O95983 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.72■□□□□ 0.59
MBD3O95983 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.72■□□□□ 0.59
MBD3O95983 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.72■□□□□ 0.59
MBD3O95983 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.72■□□□□ 0.59
MBD3O95983 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
MBD3O95983 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.72■□□□□ 0.59
MBD3O95983 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.72■□□□□ 0.59
MBD3O95983 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
MBD3O95983 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.72■□□□□ 0.59
MBD3O95983 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.72■□□□□ 0.59
MBD3O95983 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3O95983 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3O95983 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.71■□□□□ 0.59
MBD3O95983 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3O95983 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3O95983 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3O95983 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.71■□□□□ 0.59
MBD3O95983 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3O95983 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3O95983 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3O95983 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.71■□□□□ 0.59
MBD3O95983 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3O95983 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.71■□□□□ 0.59
MBD3O95983 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3O95983 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3O95983 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.71■□□□□ 0.59
MBD3O95983 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3O95983 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.71■□□□□ 0.59
MBD3O95983 HAUS4P1-201ENST00000406739 1145 ntBASIC18.71■□□□□ 0.59
MBD3O95983 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.71■□□□□ 0.59
MBD3O95983 AP002383.4-201ENST00000442518 975 ntBASIC18.71■□□□□ 0.59
MBD3O95983 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
MBD3O95983 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.71■□□□□ 0.59
MBD3O95983 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.71■□□□□ 0.59
MBD3O95983 AL160237.2-201ENST00000556165 472 ntBASIC18.71■□□□□ 0.59
MBD3O95983 AP002414.4-201ENST00000589764 1148 ntBASIC18.71■□□□□ 0.59
MBD3O95983 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
MBD3O95983 AL121956.5-201ENST00000625261 221 ntBASIC18.71■□□□□ 0.59
MBD3O95983 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.71■□□□□ 0.59
MBD3O95983 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.71■□□□□ 0.59
MBD3O95983 AC007292.2-201ENST00000593524 1812 ntBASIC18.71■□□□□ 0.59
MBD3O95983 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
MBD3O95983 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3O95983 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3O95983 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3O95983 TCAF2P1-201ENST00000291129 2421 ntBASIC18.71■□□□□ 0.59
MBD3O95983 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
MBD3O95983 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3O95983 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.71■□□□□ 0.59
MBD3O95983 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.71■□□□□ 0.59
MBD3O95983 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms