Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LGI1O95970 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LGI1O95970 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
LGI1O95970 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LGI1O95970 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LGI1O95970 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.09■□□□□ 0.01
LGI1O95970 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.09■□□□□ 0.01
LGI1O95970 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LGI1O95970 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LGI1O95970 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.09■□□□□ 0.01
LGI1O95970 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.09■□□□□ 0.01
LGI1O95970 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.09■□□□□ 0.01
LGI1O95970 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.09■□□□□ 0.01
LGI1O95970 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.09■□□□□ 0.01
LGI1O95970 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LGI1O95970 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.09■□□□□ 0.01
LGI1O95970 CRYGEP-201ENST00000412192 528 ntBASIC15.09■□□□□ 0.01
LGI1O95970 AC009947.1-201ENST00000444350 727 ntBASIC15.09■□□□□ 0.01
LGI1O95970 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LGI1O95970 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.09■□□□□ 0.01
LGI1O95970 UNC93B6-202ENST00000528242 690 ntBASIC15.09■□□□□ 0.01
LGI1O95970 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.09■□□□□ 0.01
LGI1O95970 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.09■□□□□ 0.01
LGI1O95970 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 AC120114.3-201ENST00000611923 658 ntBASIC15.09■□□□□ 0.01
LGI1O95970 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.09■□□□□ 0.01
LGI1O95970 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 IL9RP2-201ENST00000423948 1312 ntBASIC15.09■□□□□ 0.01
LGI1O95970 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.09■□□□□ 0.01
LGI1O95970 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LGI1O95970 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.09■□□□□ 0.01
LGI1O95970 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.09■□□□□ 0.01
LGI1O95970 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LGI1O95970 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.09■□□□□ 0.01
LGI1O95970 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LGI1O95970 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
LGI1O95970 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LGI1O95970 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LGI1O95970 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LGI1O95970 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.08■□□□□ 0
LGI1O95970 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 AC008677.1-201ENST00000519230 1561 ntBASIC15.08■□□□□ 0
LGI1O95970 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.08■□□□□ 0
LGI1O95970 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LGI1O95970 AC093724.1-201ENST00000448659 1027 ntBASIC15.08■□□□□ 0
LGI1O95970 HCG4B-203ENST00000450128 991 ntBASIC15.08■□□□□ 0
LGI1O95970 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.08■□□□□ 0
LGI1O95970 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 AC109635.5-201ENST00000533593 962 ntBASIC15.08■□□□□ 0
LGI1O95970 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.08■□□□□ 0
LGI1O95970 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.08■□□□□ 0
LGI1O95970 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.08■□□□□ 0
LGI1O95970 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
LGI1O95970 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.08■□□□□ 0
LGI1O95970 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.08■□□□□ 0
LGI1O95970 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LGI1O95970 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.08■□□□□ 0
LGI1O95970 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.08■□□□□ 0
LGI1O95970 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
LGI1O95970 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.07■□□□□ 0
LGI1O95970 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LGI1O95970 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LGI1O95970 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
LGI1O95970 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LGI1O95970 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.07■□□□□ 0
LGI1O95970 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms