Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF4O60810 AC105233.2-201ENST00000523697 349 ntBASIC15.66■□□□□ 0.1
PRAMEF4O60810 AF228730.5-201ENST00000530288 346 ntBASIC15.66■□□□□ 0.1
PRAMEF4O60810 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 SPTSSB-204ENST00000617024 1292 ntBASIC15.66■□□□□ 0.1
PRAMEF4O60810 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.66■□□□□ 0.1
PRAMEF4O60810 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF4O60810 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF4O60810 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF4O60810 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF4O60810 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.66■□□□□ 0.1
PRAMEF4O60810 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF4O60810 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF4O60810 AC105917.1-201ENST00000506637 2539 ntBASIC15.66■□□□□ 0.1
PRAMEF4O60810 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF4O60810 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF4O60810 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF4O60810 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF4O60810 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF4O60810 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF4O60810 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.66■□□□□ 0.1
PRAMEF4O60810 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 ELL2P1-201ENST00000413990 1906 ntBASIC15.65■□□□□ 0.1
PRAMEF4O60810 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 AC069335.1-201ENST00000489972 472 ntBASIC15.65■□□□□ 0.1
PRAMEF4O60810 AC098859.1-201ENST00000502915 1238 ntBASIC15.65■□□□□ 0.1
PRAMEF4O60810 FAM86C2P-203ENST00000528684 1004 ntBASIC15.65■□□□□ 0.1
PRAMEF4O60810 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 AP000842.3-202ENST00000569238 1080 ntBASIC15.65■□□□□ 0.1
PRAMEF4O60810 AC061975.2-201ENST00000581722 295 ntBASIC15.65■□□□□ 0.1
PRAMEF4O60810 AL365330.1-201ENST00000607459 531 ntBASIC15.65■□□□□ 0.1
PRAMEF4O60810 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 AL162727.3-201ENST00000635661 2787 ntBASIC15.65■□□□□ 0.1
PRAMEF4O60810 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF4O60810 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PRAMEF4O60810 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
PRAMEF4O60810 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms