Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PHGDHO43175 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.27■□□□□ 0.2
PHGDHO43175 MRPL3P1-201ENST00000400109 1033 ntBASIC16.27■□□□□ 0.2
PHGDHO43175 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.27■□□□□ 0.2
PHGDHO43175 AC009947.1-201ENST00000444350 727 ntBASIC16.27■□□□□ 0.2
PHGDHO43175 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.27■□□□□ 0.2
PHGDHO43175 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.27■□□□□ 0.2
PHGDHO43175 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PHGDHO43175 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PHGDHO43175 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.27■□□□□ 0.2
PHGDHO43175 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 AL645728.2-201ENST00000641974 660 ntBASIC16.27■□□□□ 0.2
PHGDHO43175 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHGDHO43175 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PHGDHO43175 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PHGDHO43175 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PHGDHO43175 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.27■□□□□ 0.19
PHGDHO43175 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHGDHO43175 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PHGDHO43175 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PHGDHO43175 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHGDHO43175 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PHGDHO43175 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PHGDHO43175 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.27■□□□□ 0.19
PHGDHO43175 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.27■□□□□ 0.19
PHGDHO43175 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.27■□□□□ 0.19
PHGDHO43175 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.27■□□□□ 0.19
PHGDHO43175 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PHGDHO43175 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHGDHO43175 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.26■□□□□ 0.19
PHGDHO43175 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHGDHO43175 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHGDHO43175 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.26■□□□□ 0.19
PHGDHO43175 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.26■□□□□ 0.19
PHGDHO43175 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PHGDHO43175 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHGDHO43175 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHGDHO43175 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHGDHO43175 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PHGDHO43175 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHGDHO43175 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHGDHO43175 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHGDHO43175 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHGDHO43175 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.26■□□□□ 0.19
PHGDHO43175 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PHGDHO43175 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.26■□□□□ 0.19
PHGDHO43175 AL450487.1-201ENST00000426799 995 ntBASIC16.26■□□□□ 0.19
PHGDHO43175 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.26■□□□□ 0.19
PHGDHO43175 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.26■□□□□ 0.19
PHGDHO43175 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PHGDHO43175 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.26■□□□□ 0.19
PHGDHO43175 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.26■□□□□ 0.19
PHGDHO43175 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHGDHO43175 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
PHGDHO43175 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.26■□□□□ 0.19
PHGDHO43175 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PHGDHO43175 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
PHGDHO43175 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.26■□□□□ 0.19
PHGDHO43175 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHGDHO43175 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PHGDHO43175 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PHGDHO43175 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHGDHO43175 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHGDHO43175 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PHGDHO43175 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHGDHO43175 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.26■□□□□ 0.19
PHGDHO43175 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PHGDHO43175 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.25■□□□□ 0.19
PHGDHO43175 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.25■□□□□ 0.19
PHGDHO43175 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
PHGDHO43175 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PHGDHO43175 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.25■□□□□ 0.19
PHGDHO43175 MIR648-201ENST00000385046 94 ntBASIC16.25■□□□□ 0.19
PHGDHO43175 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PHGDHO43175 PMS2P4-201ENST00000412466 1052 ntBASIC16.25■□□□□ 0.19
PHGDHO43175 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.25■□□□□ 0.19
PHGDHO43175 FAAHP1-202ENST00000446499 1238 ntBASIC16.25■□□□□ 0.19
PHGDHO43175 RNA5SP419-201ENST00000515908 135 ntBASIC16.25■□□□□ 0.19
PHGDHO43175 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.25■□□□□ 0.19
PHGDHO43175 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.25■□□□□ 0.19
PHGDHO43175 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PHGDHO43175 AC010507.1-201ENST00000633895 436 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms