Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CUX2O14529 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC27.31■■□□□ 1.96
CUX2O14529 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC27.31■■□□□ 1.96
CUX2O14529 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC27.31■■□□□ 1.96
CUX2O14529 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
CUX2O14529 AP003392.6-201ENST00000607709 325 ntBASIC27.31■■□□□ 1.96
CUX2O14529 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC27.31■■□□□ 1.96
CUX2O14529 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CUX2O14529 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC27.3■■□□□ 1.96
CUX2O14529 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CUX2O14529 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CUX2O14529 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
CUX2O14529 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC27.3■■□□□ 1.96
CUX2O14529 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
CUX2O14529 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
CUX2O14529 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC27.3■■□□□ 1.96
CUX2O14529 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
CUX2O14529 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC27.3■■□□□ 1.96
CUX2O14529 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CUX2O14529 MIR1202-201ENST00000408529 83 ntBASIC27.3■■□□□ 1.96
CUX2O14529 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC27.3■■□□□ 1.96
CUX2O14529 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CUX2O14529 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC27.3■■□□□ 1.96
CUX2O14529 AC019193.1-201ENST00000506678 823 ntBASIC27.3■■□□□ 1.96
CUX2O14529 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC27.3■■□□□ 1.96
CUX2O14529 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC27.3■■□□□ 1.96
CUX2O14529 PLS3-210ENST00000626746 216 ntTSL 4 BASIC27.3■■□□□ 1.96
CUX2O14529 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
CUX2O14529 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CUX2O14529 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CUX2O14529 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CUX2O14529 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CUX2O14529 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CUX2O14529 RERG-209ENST00000546331 1383 ntTSL 2 BASIC27.29■■□□□ 1.96
CUX2O14529 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CUX2O14529 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CUX2O14529 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CUX2O14529 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CUX2O14529 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CUX2O14529 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC27.29■■□□□ 1.96
CUX2O14529 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CUX2O14529 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CUX2O14529 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CUX2O14529 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC27.29■■□□□ 1.96
CUX2O14529 AL022344.2-201ENST00000568976 968 ntBASIC27.29■■□□□ 1.96
CUX2O14529 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
CUX2O14529 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CUX2O14529 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CUX2O14529 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
CUX2O14529 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
CUX2O14529 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
CUX2O14529 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CUX2O14529 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CUX2O14529 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC27.28■■□□□ 1.96
CUX2O14529 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CUX2O14529 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC27.28■■□□□ 1.96
CUX2O14529 Z97180.1-201ENST00000445173 988 ntBASIC27.28■■□□□ 1.96
CUX2O14529 FGFR3P1-201ENST00000449999 601 ntBASIC27.28■■□□□ 1.96
CUX2O14529 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC27.28■■□□□ 1.96
CUX2O14529 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC27.28■■□□□ 1.96
CUX2O14529 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CUX2O14529 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC27.28■■□□□ 1.96
CUX2O14529 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC27.28■■□□□ 1.96
CUX2O14529 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CUX2O14529 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CUX2O14529 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CUX2O14529 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
CUX2O14529 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CUX2O14529 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CUX2O14529 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CUX2O14529 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CUX2O14529 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CUX2O14529 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CUX2O14529 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CUX2O14529 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC27.27■■□□□ 1.96
CUX2O14529 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CUX2O14529 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CUX2O14529 CNN2P10-201ENST00000443067 918 ntBASIC27.27■■□□□ 1.96
CUX2O14529 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC27.27■■□□□ 1.96
CUX2O14529 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CUX2O14529 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC27.27■■□□□ 1.96
CUX2O14529 WDR7-208ENST00000589935 544 ntTSL 4 BASIC27.27■■□□□ 1.96
CUX2O14529 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CUX2O14529 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
CUX2O14529 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
CUX2O14529 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
CUX2O14529 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CUX2O14529 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CUX2O14529 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.96
CUX2O14529 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC27.26■■□□□ 1.96
CUX2O14529 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
CUX2O14529 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
CUX2O14529 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CUX2O14529 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CUX2O14529 ACTG1P2-201ENST00000415776 1125 ntBASIC27.26■■□□□ 1.95
CUX2O14529 ACTG1P11-201ENST00000425411 1125 ntBASIC27.26■■□□□ 1.95
CUX2O14529 AL161670.2-201ENST00000557650 1227 ntBASIC27.26■■□□□ 1.95
CUX2O14529 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CUX2O14529 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC27.26■■□□□ 1.95
CUX2O14529 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms