Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
FOXN3O00409 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXN3O00409 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXN3O00409 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
FOXN3O00409 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXN3O00409 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXN3O00409 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXN3O00409 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
FOXN3O00409 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXN3O00409 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXN3O00409 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXN3O00409 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXN3O00409 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXN3O00409 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXN3O00409 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXN3O00409 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
FOXN3O00409 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
FOXN3O00409 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXN3O00409 TFAMP1-201ENST00000412727 736 ntBASIC17.44■□□□□ 0.38
FOXN3O00409 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXN3O00409 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXN3O00409 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXN3O00409 AC073389.1-201ENST00000595595 795 ntBASIC17.44■□□□□ 0.38
FOXN3O00409 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
FOXN3O00409 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXN3O00409 AL365330.1-201ENST00000607459 531 ntBASIC17.44■□□□□ 0.38
FOXN3O00409 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.44■□□□□ 0.38
FOXN3O00409 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXN3O00409 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXN3O00409 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXN3O00409 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXN3O00409 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
FOXN3O00409 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXN3O00409 AKAP8P1-201ENST00000434743 1349 ntBASIC17.44■□□□□ 0.38
FOXN3O00409 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
FOXN3O00409 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXN3O00409 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.43■□□□□ 0.38
FOXN3O00409 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.43■□□□□ 0.38
FOXN3O00409 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXN3O00409 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
FOXN3O00409 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXN3O00409 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXN3O00409 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.43■□□□□ 0.38
FOXN3O00409 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
FOXN3O00409 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.43■□□□□ 0.38
FOXN3O00409 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.43■□□□□ 0.38
FOXN3O00409 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.43■□□□□ 0.38
FOXN3O00409 AP000347.1-202ENST00000435868 847 ntBASIC17.43■□□□□ 0.38
FOXN3O00409 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXN3O00409 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXN3O00409 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.43■□□□□ 0.38
FOXN3O00409 AL135744.1-201ENST00000565098 629 ntBASIC17.43■□□□□ 0.38
FOXN3O00409 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXN3O00409 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.43■□□□□ 0.38
FOXN3O00409 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 AL139384.1-201ENST00000612143 3047 ntBASIC17.43■□□□□ 0.38
FOXN3O00409 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FOXN3O00409 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
FOXN3O00409 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXN3O00409 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXN3O00409 AP003680.1-201ENST00000598970 3660 ntBASIC17.43■□□□□ 0.38
FOXN3O00409 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
FOXN3O00409 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXN3O00409 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXN3O00409 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXN3O00409 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXN3O00409 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXN3O00409 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.42■□□□□ 0.38
FOXN3O00409 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXN3O00409 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
FOXN3O00409 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
FOXN3O00409 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXN3O00409 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms