Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 PRYP5-201ENST00000451909 266 ntBASIC11.5□□□□□ -0.57
LINC01546A6NGU7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 AF228730.7-201ENST00000641842 219 ntBASIC11.5□□□□□ -0.57
LINC01546A6NGU7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 HSPA7-201ENST00000445535 1927 ntBASIC11.5□□□□□ -0.57
LINC01546A6NGU7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 REXO1L1P-202ENST00000608646 1974 ntBASIC11.5□□□□□ -0.57
LINC01546A6NGU7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 AP001282.1-201ENST00000531301 1499 ntBASIC11.5□□□□□ -0.57
LINC01546A6NGU7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01546A6NGU7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 AC079776.2-201ENST00000641154 1609 ntBASIC11.49□□□□□ -0.57
LINC01546A6NGU7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.49□□□□□ -0.57
LINC01546A6NGU7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 MIR718-201ENST00000390190 70 ntBASIC11.49□□□□□ -0.57
LINC01546A6NGU7 HCG4-201ENST00000418983 998 ntBASIC11.49□□□□□ -0.57
LINC01546A6NGU7 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.49□□□□□ -0.57
LINC01546A6NGU7 TSPY22P-201ENST00000427496 604 ntBASIC11.49□□□□□ -0.57
LINC01546A6NGU7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 SLC25A3P1-201ENST00000443844 931 ntBASIC11.49□□□□□ -0.57
LINC01546A6NGU7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 LINC01568-207ENST00000641790 1380 ntBASIC11.49□□□□□ -0.57
LINC01546A6NGU7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC11.49□□□□□ -0.57
LINC01546A6NGU7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
LINC01546A6NGU7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01546A6NGU7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms