Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 AC104076.2-201ENST00000448912 469 ntBASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 KRT18P1-202ENST00000452408 1331 ntBASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV18A0A075B6X5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV18A0A075B6X5 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV18A0A075B6X5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV18A0A075B6X5 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV18A0A075B6X5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV18A0A075B6X5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV18A0A075B6X5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.08□□□□□ -0.15
TRAV18A0A075B6X5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.15
TRAV18A0A075B6X5 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV18A0A075B6X5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 ABCD1P5-201ENST00000445663 754 ntBASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 KRT17P6-201ENST00000453795 1220 ntBASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 AC022616.7-201ENST00000525383 220 ntBASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 AC091167.2-201ENST00000579581 588 ntBASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 CYP2A7P1-201ENST00000595391 815 ntBASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 AC114341.1-201ENST00000618070 349 ntBASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRAV18A0A075B6X5 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms