Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNPO2Q9UMS6 MTHFR-217ENST00000641820 1569 ntBASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 PHKG1P2-201ENST00000457537 863 ntBASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 CHCHD2P3-201ENST00000603038 451 ntBASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 AC093726.1-201ENST00000608064 963 ntBASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 AC092171.3-201ENST00000610122 2651 ntBASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNPO2Q9UMS6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SYNPO2Q9UMS6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SYNPO2Q9UMS6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.58■□□□□ 0.57
SYNPO2Q9UMS6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SYNPO2Q9UMS6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SYNPO2Q9UMS6 AC020916.1-201ENST00000587762 1774 ntBASIC18.58■□□□□ 0.57
SYNPO2Q9UMS6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SYNPO2Q9UMS6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.58■□□□□ 0.57
SYNPO2Q9UMS6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SYNPO2Q9UMS6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 AL589987.1-201ENST00000453380 819 ntBASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.58■□□□□ 0.56
SYNPO2Q9UMS6 AC011676.5-201ENST00000624864 2660 ntBASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 AC011477.6-201ENST00000604980 1927 ntBASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 AC012313.1-201ENST00000593393 3059 ntBASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 AC106820.2-201ENST00000563775 3264 ntBASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 TOMM22P5-201ENST00000416399 439 ntBASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 AC074338.1-201ENST00000416825 156 ntBASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 TARDBPP1-201ENST00000442013 1203 ntBASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.57■□□□□ 0.56
SYNPO2Q9UMS6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms