Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.28□□□□□ -0.6
CDC42SE2Q9NRR3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CDC42SE2Q9NRR3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CDC42SE2Q9NRR3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CDC42SE2Q9NRR3 MST1L-201ENST00000442552 2185 ntBASIC11.27□□□□□ -0.6
CDC42SE2Q9NRR3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CDC42SE2Q9NRR3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CDC42SE2Q9NRR3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.6
CDC42SE2Q9NRR3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CDC42SE2Q9NRR3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 KRT18P27-201ENST00000427733 1299 ntBASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 AC091304.2-201ENST00000564639 760 ntBASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 AC008667.4-201ENST00000607370 168 ntBASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 AC092919.2-201ENST00000623631 1645 ntBASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 AC013268.4-201ENST00000637413 2228 ntBASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE2Q9NRR3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 AC073621.1-201ENST00000392730 636 ntBASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 TSPY19P-201ENST00000418461 509 ntBASIC11.26□□□□□ -0.61
CDC42SE2Q9NRR3 DUSP5P1-201ENST00000441325 1139 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms