Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 AC011477.6-201ENST00000604980 1927 ntBASIC17.45■□□□□ 0.38
SIX2Q9NPC8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.45■□□□□ 0.38
SIX2Q9NPC8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 MIR346-201ENST00000362234 95 ntBASIC17.44■□□□□ 0.38
SIX2Q9NPC8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 AC004832.2-201ENST00000426397 482 ntBASIC17.44■□□□□ 0.38
SIX2Q9NPC8 AP000347.1-202ENST00000435868 847 ntBASIC17.44■□□□□ 0.38
SIX2Q9NPC8 SPCS2P4-201ENST00000436160 681 ntBASIC17.44■□□□□ 0.38
SIX2Q9NPC8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SIX2Q9NPC8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 YBX2P1-201ENST00000394192 760 ntBASIC17.43■□□□□ 0.38
SIX2Q9NPC8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 ALG1L5P-201ENST00000482043 771 ntBASIC17.43■□□□□ 0.38
SIX2Q9NPC8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX2Q9NPC8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms