Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 WASH6P-202ENST00000359512 1437 ntBASIC15.16■□□□□ 0.02
UBQLN3Q9H347 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 AL512652.2-201ENST00000625156 1716 ntBASIC15.15■□□□□ 0.02
UBQLN3Q9H347 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 AC243562.1-201ENST00000560672 389 ntBASIC15.15■□□□□ 0.02
UBQLN3Q9H347 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBQLN3Q9H347 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 AC105917.1-201ENST00000506637 2539 ntBASIC15.14■□□□□ 0.01
UBQLN3Q9H347 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.14■□□□□ 0.01
UBQLN3Q9H347 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 SPDYE11-202ENST00000450699 704 ntBASIC15.14■□□□□ 0.01
UBQLN3Q9H347 TIMM8BP1-201ENST00000452384 211 ntBASIC15.14■□□□□ 0.01
UBQLN3Q9H347 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 SPDYE9P-201ENST00000570642 692 ntBASIC15.14■□□□□ 0.01
UBQLN3Q9H347 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 AC021097.1-201ENST00000607902 574 ntBASIC15.14■□□□□ 0.01
UBQLN3Q9H347 SPDYE10P-202ENST00000612005 668 ntBASIC15.14■□□□□ 0.01
UBQLN3Q9H347 SPDYE8P-202ENST00000612377 668 ntBASIC15.14■□□□□ 0.01
UBQLN3Q9H347 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN3Q9H347 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms