Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 FAM58CP-201ENST00000435741 640 ntBASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 HMGN1P19-201ENST00000436976 333 ntBASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 ACTG1P14-201ENST00000446382 1122 ntBASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 AC124947.2-201ENST00000547118 1133 ntBASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 AC092364.2-201ENST00000596710 2692 ntBASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAF4Q9BUZ4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 AL031432.2-201ENST00000566714 459 ntBASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 AL928711.1-201ENST00000570165 459 ntBASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAF4Q9BUZ4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TRAF4Q9BUZ4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
TRAF4Q9BUZ4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAF4Q9BUZ4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAF4Q9BUZ4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAF4Q9BUZ4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAF4Q9BUZ4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TRAF4Q9BUZ4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms