Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC005622.1-201ENST00000636801 1703 ntBASIC17.27■□□□□ 0.35
RAD9AQ99638 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RAD9AQ99638 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RAD9AQ99638 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAD9AQ99638 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAD9AQ99638 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RAD9AQ99638 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.26■□□□□ 0.35
RAD9AQ99638 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.26■□□□□ 0.35
RAD9AQ99638 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
RAD9AQ99638 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RAD9AQ99638 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.26■□□□□ 0.35
RAD9AQ99638 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.26■□□□□ 0.35
RAD9AQ99638 PFN1P12-201ENST00000455938 534 ntBASIC17.26■□□□□ 0.35
RAD9AQ99638 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.26■□□□□ 0.35
RAD9AQ99638 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.26■□□□□ 0.35
RAD9AQ99638 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.26■□□□□ 0.35
RAD9AQ99638 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.26■□□□□ 0.35
RAD9AQ99638 AL359711.2-201ENST00000563105 872 ntBASIC17.26■□□□□ 0.35
RAD9AQ99638 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.26■□□□□ 0.35
RAD9AQ99638 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.26■□□□□ 0.35
RAD9AQ99638 BRI3BPP1-201ENST00000594224 787 ntBASIC17.26■□□□□ 0.35
RAD9AQ99638 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAD9AQ99638 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RAD9AQ99638 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.26■□□□□ 0.35
RAD9AQ99638 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.26■□□□□ 0.35
RAD9AQ99638 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RAD9AQ99638 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD9AQ99638 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RAD9AQ99638 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.25■□□□□ 0.35
RAD9AQ99638 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RAD9AQ99638 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.25■□□□□ 0.35
RAD9AQ99638 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.25■□□□□ 0.35
RAD9AQ99638 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RAD9AQ99638 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RAD9AQ99638 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.25■□□□□ 0.35
RAD9AQ99638 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 RPL13P2-201ENST00000440687 659 ntBASIC17.25■□□□□ 0.35
RAD9AQ99638 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.25■□□□□ 0.35
RAD9AQ99638 FAM86LP-201ENST00000478302 853 ntBASIC17.25■□□□□ 0.35
RAD9AQ99638 AC108725.1-201ENST00000495472 409 ntBASIC17.25■□□□□ 0.35
RAD9AQ99638 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.25■□□□□ 0.35
RAD9AQ99638 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.25■□□□□ 0.35
RAD9AQ99638 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 AP000812.2-201ENST00000538934 718 ntBASIC17.25■□□□□ 0.35
RAD9AQ99638 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.25■□□□□ 0.35
RAD9AQ99638 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.25■□□□□ 0.35
RAD9AQ99638 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.25■□□□□ 0.35
RAD9AQ99638 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.25■□□□□ 0.35
RAD9AQ99638 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RAD9AQ99638 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RAD9AQ99638 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.25■□□□□ 0.35
RAD9AQ99638 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.25■□□□□ 0.35
RAD9AQ99638 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.25■□□□□ 0.35
RAD9AQ99638 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.25■□□□□ 0.35
RAD9AQ99638 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAD9AQ99638 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.25■□□□□ 0.35
RAD9AQ99638 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD9AQ99638 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD9AQ99638 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RAD9AQ99638 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD9AQ99638 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RAD9AQ99638 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAD9AQ99638 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms