Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH4Q99466 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH4Q99466 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH4Q99466 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH4Q99466 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH4Q99466 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH4Q99466 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH4Q99466 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH4Q99466 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.54■□□□□ 0.24
NOTCH4Q99466 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 AC068587.3-201ENST00000526613 355 ntBASIC16.54■□□□□ 0.24
NOTCH4Q99466 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 AL359711.2-201ENST00000563105 872 ntBASIC16.54■□□□□ 0.24
NOTCH4Q99466 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 AC133552.6-201ENST00000613406 534 ntBASIC16.54■□□□□ 0.24
NOTCH4Q99466 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH4Q99466 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH4Q99466 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH4Q99466 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NOTCH4Q99466 ME2P1-201ENST00000426028 1970 ntBASIC16.54■□□□□ 0.24
NOTCH4Q99466 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.54■□□□□ 0.24
NOTCH4Q99466 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 AL355994.2-201ENST00000447882 704 ntBASIC16.53■□□□□ 0.24
NOTCH4Q99466 PHKG1P2-201ENST00000457537 863 ntBASIC16.53■□□□□ 0.24
NOTCH4Q99466 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 ALOX12P2-203ENST00000570921 1945 ntBASIC16.53■□□□□ 0.24
NOTCH4Q99466 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 AC120045.2-201ENST00000567334 178 ntBASIC16.53■□□□□ 0.24
NOTCH4Q99466 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.53■□□□□ 0.24
NOTCH4Q99466 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH4Q99466 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NOTCH4Q99466 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH4Q99466 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH4Q99466 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH4Q99466 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH4Q99466 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH4Q99466 MIR1908-201ENST00000410394 80 ntBASIC16.52■□□□□ 0.24
NOTCH4Q99466 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH4Q99466 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms