Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.89■□□□□ 0.62
CDK5RAP2Q96SN8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.89■□□□□ 0.62
CDK5RAP2Q96SN8 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.89■□□□□ 0.62
CDK5RAP2Q96SN8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDK5RAP2Q96SN8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDK5RAP2Q96SN8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.89■□□□□ 0.62
CDK5RAP2Q96SN8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.89■□□□□ 0.62
CDK5RAP2Q96SN8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDK5RAP2Q96SN8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 MYCLP2-201ENST00000449268 967 ntBASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 FZD10-202ENST00000539839 3282 ntBASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 REXO1L1P-202ENST00000608646 1974 ntBASIC18.89■□□□□ 0.61
CDK5RAP2Q96SN8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 KRT17P7-201ENST00000451704 1104 ntBASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 TMEM261P1-201ENST00000604899 340 ntBASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 AC020916.1-201ENST00000587762 1774 ntBASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP2Q96SN8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 INTS4P2-202ENST00000614726 2019 ntBASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.87■□□□□ 0.61
CDK5RAP2Q96SN8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms