Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.08□□□□□ -0.16
CMTM3Q96MX0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 SLC22A20-204ENST00000530038 1673 ntBASIC14.07□□□□□ -0.16
CMTM3Q96MX0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 CICP23-201ENST00000605013 2741 ntBASIC14.07□□□□□ -0.16
CMTM3Q96MX0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 AC087499.1-201ENST00000418141 1075 ntBASIC14.07□□□□□ -0.16
CMTM3Q96MX0 HCG4-201ENST00000418983 998 ntBASIC14.07□□□□□ -0.16
CMTM3Q96MX0 PMS2P1-201ENST00000431037 1228 ntBASIC14.07□□□□□ -0.16
CMTM3Q96MX0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 AC091607.1-201ENST00000490318 1060 ntBASIC14.07□□□□□ -0.16
CMTM3Q96MX0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 AC133561.5-201ENST00000635547 218 ntBASIC14.07□□□□□ -0.16
CMTM3Q96MX0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 AC090616.6-203ENST00000579186 1945 ntBASIC14.07□□□□□ -0.16
CMTM3Q96MX0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMTM3Q96MX0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 MROH4P-201ENST00000431302 1578 ntBASIC14.06□□□□□ -0.16
CMTM3Q96MX0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 AC023908.3-201ENST00000564211 3047 ntBASIC14.06□□□□□ -0.16
CMTM3Q96MX0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.06□□□□□ -0.16
CMTM3Q96MX0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 ABCD1P5-201ENST00000445663 754 ntBASIC14.06□□□□□ -0.16
CMTM3Q96MX0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 AC245100.5-201ENST00000452108 331 ntBASIC14.06□□□□□ -0.16
CMTM3Q96MX0 AC087163.2-201ENST00000457299 853 ntBASIC14.06□□□□□ -0.16
CMTM3Q96MX0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 AP005901.3-202ENST00000581653 237 ntBASIC14.06□□□□□ -0.16
CMTM3Q96MX0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMTM3Q96MX0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms