Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.33□□□□□ -0.11
SPTSSAQ969W0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 AL591424.1-201ENST00000442569 1213 ntBASIC14.33□□□□□ -0.12
SPTSSAQ969W0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 KRT19P2-202ENST00000557173 1012 ntBASIC14.33□□□□□ -0.12
SPTSSAQ969W0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 AC018845.2-201ENST00000568326 409 ntBASIC14.33□□□□□ -0.12
SPTSSAQ969W0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 AL078644.1-201ENST00000609881 752 ntBASIC14.33□□□□□ -0.12
SPTSSAQ969W0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSAQ969W0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 MIR648-201ENST00000385046 94 ntBASIC14.32□□□□□ -0.12
SPTSSAQ969W0 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSAQ969W0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms