Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 AL365330.1-201ENST00000607459 531 ntBASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 HLA-V-201ENST00000429037 534 ntBASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 AC093726.1-201ENST00000608064 963 ntBASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC24.84■■□□□ 1.57
CCNB3Q8WWL7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCNB3Q8WWL7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCNB3Q8WWL7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CCNB3Q8WWL7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC24.83■■□□□ 1.57
CCNB3Q8WWL7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CCNB3Q8WWL7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC24.83■■□□□ 1.57
CCNB3Q8WWL7 AC106886.1-201ENST00000568660 600 ntBASIC24.83■■□□□ 1.57
CCNB3Q8WWL7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
CCNB3Q8WWL7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC24.83■■□□□ 1.57
CCNB3Q8WWL7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
CCNB3Q8WWL7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CCNB3Q8WWL7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCNB3Q8WWL7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CCNB3Q8WWL7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.56
CCNB3Q8WWL7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.56
CCNB3Q8WWL7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC24.83■■□□□ 1.56
CCNB3Q8WWL7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 MIR1909-201ENST00000411312 80 ntBASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 TMEM14DP-201ENST00000422205 345 ntBASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCNB3Q8WWL7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CCNB3Q8WWL7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CCNB3Q8WWL7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CCNB3Q8WWL7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CCNB3Q8WWL7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC24.81■■□□□ 1.56
CCNB3Q8WWL7 AC112492.5-201ENST00000421897 457 ntBASIC24.81■■□□□ 1.56
CCNB3Q8WWL7 TTTY23B-201ENST00000442790 549 ntBASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms