Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 AC004223.2-201ENST00000590309 544 ntBASIC16.59■□□□□ 0.25
PTCD2Q8WV60 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 AC022960.2-201ENST00000616300 666 ntBASIC16.59■□□□□ 0.25
PTCD2Q8WV60 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 AL592424.1-201ENST00000563624 1536 ntBASIC16.59■□□□□ 0.25
PTCD2Q8WV60 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTCD2Q8WV60 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTCD2Q8WV60 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PTCD2Q8WV60 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTCD2Q8WV60 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTCD2Q8WV60 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 TMF1P1-201ENST00000576058 373 ntBASIC16.58■□□□□ 0.24
PTCD2Q8WV60 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 AC027612.4-201ENST00000605371 583 ntBASIC16.58■□□□□ 0.24
PTCD2Q8WV60 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 U82695.1-201ENST00000635752 1889 ntBASIC16.58■□□□□ 0.24
PTCD2Q8WV60 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCD2Q8WV60 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 AC079328.2-201ENST00000561241 3354 ntBASIC16.57■□□□□ 0.24
PTCD2Q8WV60 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 AL365203.3-201ENST00000609742 2057 ntBASIC16.57■□□□□ 0.24
PTCD2Q8WV60 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 AC005622.1-201ENST00000636801 1703 ntBASIC16.57■□□□□ 0.24
PTCD2Q8WV60 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 AC007919.2-201ENST00000444110 511 ntBASIC16.57■□□□□ 0.24
PTCD2Q8WV60 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms