Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 AC060834.1-201ENST00000443027 2032 ntBASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 AD000864.1-201ENST00000624076 2295 ntBASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 AL365330.1-201ENST00000607459 531 ntBASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 PCGF3-213ENST00000620529 1899 ntBASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CARMIL3Q8ND23 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 KRT43P-201ENST00000434019 910 ntBASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 GPR182-203ENST00000622922 591 ntBASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 Z97205.2-201ENST00000564697 1639 ntBASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CARMIL3Q8ND23 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CARMIL3Q8ND23 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CARMIL3Q8ND23 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms