Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 GNAQP1-201ENST00000444815 1067 ntBASIC18.14■□□□□ 0.49
TRIM50Q86XT4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 RN7SL618P-201ENST00000477850 296 ntBASIC18.14■□□□□ 0.49
TRIM50Q86XT4 SPDYE18-201ENST00000510091 1050 ntBASIC18.14■□□□□ 0.49
TRIM50Q86XT4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 AC044860.1-202ENST00000559481 777 ntBASIC18.14■□□□□ 0.49
TRIM50Q86XT4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM50Q86XT4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 AL139384.1-201ENST00000612143 3047 ntBASIC18.13■□□□□ 0.49
TRIM50Q86XT4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.13■□□□□ 0.49
TRIM50Q86XT4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 AC135586.1-201ENST00000539323 574 ntBASIC18.13■□□□□ 0.49
TRIM50Q86XT4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 AC025048.6-201ENST00000634326 1161 ntBASIC18.13■□□□□ 0.49
TRIM50Q86XT4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 U82695.1-201ENST00000635752 1889 ntBASIC18.13■□□□□ 0.49
TRIM50Q86XT4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM50Q86XT4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 AL132655.2-201ENST00000596276 594 ntBASIC18.12■□□□□ 0.49
TRIM50Q86XT4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 LINC01144-201ENST00000626198 1710 ntBASIC18.12■□□□□ 0.49
TRIM50Q86XT4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM50Q86XT4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRIM50Q86XT4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms