Protein–RNA interactions for Protein: Q7Z4L9

PPP1R42, Protein phosphatase 1 regulatory subunit 42, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R42Q7Z4L9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PPP1R42Q7Z4L9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
PPP1R42Q7Z4L9 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
PPP1R42Q7Z4L9 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
PPP1R42Q7Z4L9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 SERBP1P3-201ENST00000459980 809 ntBASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 AL512361.1-201ENST00000554200 418 ntBASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 AC010336.2-201ENST00000564226 506 ntBASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 AC140912.1-201ENST00000577171 1054 ntBASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP1R42Q7Z4L9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 KRT17P7-201ENST00000451704 1104 ntBASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 AC005622.1-201ENST00000636801 1703 ntBASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.5■□□□□ 0.87
PPP1R42Q7Z4L9 AL662844.4-201ENST00000606367 2838 ntBASIC20.49■□□□□ 0.87
PPP1R42Q7Z4L9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP1R42Q7Z4L9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.49■□□□□ 0.87
PPP1R42Q7Z4L9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PPP1R42Q7Z4L9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP1R42Q7Z4L9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP1R42Q7Z4L9 KRT8P12-202ENST00000472924 1397 ntBASIC20.49■□□□□ 0.87
PPP1R42Q7Z4L9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP1R42Q7Z4L9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.49■□□□□ 0.87
PPP1R42Q7Z4L9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP1R42Q7Z4L9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.49■□□□□ 0.87
PPP1R42Q7Z4L9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.49■□□□□ 0.87
PPP1R42Q7Z4L9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PPP1R42Q7Z4L9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms