Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 AL135999.2-201ENST00000622438 1686 ntBASIC10.9□□□□□ -0.66
SCXQ7RTU7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 AC254562.1-201ENST00000417586 456 ntBASIC10.9□□□□□ -0.66
SCXQ7RTU7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 AC023141.13-201ENST00000604991 943 ntBASIC10.9□□□□□ -0.66
SCXQ7RTU7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
SCXQ7RTU7 AC007064.4-201ENST00000637740 555 ntBASIC10.9□□□□□ -0.66
SCXQ7RTU7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 AC025580.3-201ENST00000617932 1424 ntBASIC10.9□□□□□ -0.66
SCXQ7RTU7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCXQ7RTU7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
SCXQ7RTU7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
SCXQ7RTU7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
SCXQ7RTU7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SCXQ7RTU7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SCXQ7RTU7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
SCXQ7RTU7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SCXQ7RTU7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 CNN2P11-201ENST00000429351 262 ntBASIC10.89□□□□□ -0.67
SCXQ7RTU7 FAM58CP-201ENST00000435741 640 ntBASIC10.89□□□□□ -0.67
SCXQ7RTU7 HMGN1P19-201ENST00000436976 333 ntBASIC10.89□□□□□ -0.67
SCXQ7RTU7 RHOQP3-201ENST00000437982 621 ntBASIC10.89□□□□□ -0.67
SCXQ7RTU7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 CXCL1P1-201ENST00000502804 216 ntBASIC10.89□□□□□ -0.67
SCXQ7RTU7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC10.89□□□□□ -0.67
SCXQ7RTU7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SCXQ7RTU7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
SCXQ7RTU7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms