Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 AL691432.1-201ENST00000596308 1422 ntBASIC20.31■□□□□ 0.84
SMIM5Q71RC9 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 PFN1P12-201ENST00000455938 534 ntBASIC20.31■□□□□ 0.84
SMIM5Q71RC9 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 RN7SL560P-201ENST00000577943 264 ntBASIC20.31■□□□□ 0.84
SMIM5Q71RC9 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 AC005252.2-201ENST00000624630 1141 ntBASIC20.31■□□□□ 0.84
SMIM5Q71RC9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM5Q71RC9 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 RNF216P1-203ENST00000404404 2427 ntBASIC20.3■□□□□ 0.84
SMIM5Q71RC9 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 AGER-203ENST00000375065 665 ntTSL 2 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 AC093433.1-201ENST00000458048 571 ntBASIC20.3■□□□□ 0.84
SMIM5Q71RC9 VDAC1P7-201ENST00000462417 847 ntBASIC20.3■□□□□ 0.84
SMIM5Q71RC9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SMIM5Q71RC9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 LETM1P2-201ENST00000597330 2178 ntBASIC20.29■□□□□ 0.84
SMIM5Q71RC9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 AC134312.5-201ENST00000568031 1313 ntBASIC20.29■□□□□ 0.84
SMIM5Q71RC9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 INTS4P2-202ENST00000614726 2019 ntBASIC20.29■□□□□ 0.84
SMIM5Q71RC9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 BAATP1-201ENST00000412284 1225 ntBASIC20.29■□□□□ 0.84
SMIM5Q71RC9 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 AC134915.1-201ENST00000426461 574 ntBASIC20.29■□□□□ 0.84
SMIM5Q71RC9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 IGHJ2P-201ENST00000454480 60 ntBASIC20.29■□□□□ 0.84
SMIM5Q71RC9 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC20.29■□□□□ 0.84
SMIM5Q71RC9 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms