Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 ZBTB12BP-201ENST00000314232 1122 ntBASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 ENPP7P5-201ENST00000541031 1031 ntBASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 REXO1L1P-202ENST00000608646 1974 ntBASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 AC093433.1-201ENST00000458048 571 ntBASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
CDC42BPAQ5VT25 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 ME2P1-201ENST00000426028 1970 ntBASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 AC026410.3-201ENST00000514280 936 ntBASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 RN7SL560P-201ENST00000577943 264 ntBASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDC42BPAQ5VT25 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 DRD5P1-201ENST00000456605 1438 ntBASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 AC016694.1-201ENST00000434179 700 ntBASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 AC007551.1-201ENST00000457394 519 ntBASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 AGER-214ENST00000538695 487 ntTSL 2 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 IFT20-206ENST00000578122 834 ntTSL 2 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 IFT20-208ENST00000578985 831 ntTSL 3 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 AL139099.5-201ENST00000635274 300 ntBASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 HADH-212ENST00000638621 741 ntTSL 5 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC24.15■■□□□ 1.46
CDC42BPAQ5VT25 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CDC42BPAQ5VT25 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
CDC42BPAQ5VT25 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC24.14■■□□□ 1.46
CDC42BPAQ5VT25 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC24.14■■□□□ 1.46
CDC42BPAQ5VT25 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CDC42BPAQ5VT25 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC24.14■■□□□ 1.46
CDC42BPAQ5VT25 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms