Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.64□□□□□ -0.07
RNFT1Q5M7Z0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 AC106886.4-201ENST00000623557 2502 ntBASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 MIR4321-201ENST00000592276 80 ntBASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 CHCHD2P3-201ENST00000603038 451 ntBASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 AC004461.2-201ENST00000629517 803 ntBASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 AL109936.8-201ENST00000641772 604 ntBASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RNFT1Q5M7Z0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 GK-202ENST00000378941 458 ntTSL 3 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 DGCR5-201ENST00000399539 862 ntBASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 DFFBP1-201ENST00000433250 979 ntBASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 AL589987.1-201ENST00000453380 819 ntBASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 AC140912.1-201ENST00000577171 1054 ntBASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 AC005052.1-201ENST00000625181 2492 ntBASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNFT1Q5M7Z0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 AC009053.2-201ENST00000563701 2365 ntBASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms