Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 CDC14C-201ENST00000428251 1719 ntBASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 AC069224.1-201ENST00000566372 1715 ntBASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 AC008894.3-201ENST00000624324 3103 ntBASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 AC061975.2-201ENST00000581722 295 ntBASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 AC055717.3-201ENST00000622967 595 ntBASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 LINC02447-202ENST00000501888 2146 ntBASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 AC008677.1-201ENST00000519230 1561 ntBASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN20Q4JDL3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 KRT18P13-201ENST00000400056 1290 ntBASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 AC211486.1-202ENST00000416371 468 ntBASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 FAM58DP-201ENST00000428076 619 ntBASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 AC211476.1-201ENST00000503899 468 ntBASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 AP000344.2-201ENST00000512987 629 ntBASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 AC023511.2-201ENST00000618803 211 ntBASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN20Q4JDL3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 FAM220BP-201ENST00000377689 816 ntBASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 AL627223.1-201ENST00000416693 442 ntBASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 AC245100.5-201ENST00000452108 331 ntBASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms