Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 SPDYE21P-201ENST00000413323 827 ntBASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 BCRP1-201ENST00000444246 691 ntBASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 PAWRP1-201ENST00000451083 565 ntBASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 STK19B-204ENST00000512515 211 ntBASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 AL161772.1-201ENST00000610494 4412 ntBASIC14.38□□□□□ -0.11
CHRFAM7AQ494W8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 AC132872.4-202ENST00000622924 2756 ntBASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 HCG4B-203ENST00000450128 991 ntBASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 AC027612.4-201ENST00000605371 583 ntBASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 AC093512.1-201ENST00000617969 520 ntBASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 AC004706.3-202ENST00000621574 984 ntBASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRFAM7AQ494W8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 AC009336.1-201ENST00000608941 1553 ntBASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 ELK2BP-201ENST00000415014 1224 ntBASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CHRFAM7AQ494W8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms