Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 AZGP1P1-201ENST00000411909 902 ntBASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 RN7SL399P-201ENST00000471648 279 ntBASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 USP32P1-208ENST00000506594 1164 ntBASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 COX11-210ENST00000639671 696 ntBASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 AL033527.4-201ENST00000641026 673 ntBASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM71Q2Q1W2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 AC074338.1-201ENST00000416825 156 ntBASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 AC015936.2-201ENST00000593177 259 ntBASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 AC010319.3-201ENST00000597028 470 ntBASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 AL158212.4-201ENST00000624062 1286 ntBASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM71Q2Q1W2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 AC004987.2-201ENST00000395959 1148 ntBASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM71Q2Q1W2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms