Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
GABREP78334 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.46■□□□□ 0.07
GABREP78334 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.46■□□□□ 0.07
GABREP78334 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.46■□□□□ 0.07
GABREP78334 AC093724.1-201ENST00000448659 1027 ntBASIC15.46■□□□□ 0.07
GABREP78334 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.46■□□□□ 0.07
GABREP78334 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GABREP78334 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.46■□□□□ 0.07
GABREP78334 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GABREP78334 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.46■□□□□ 0.07
GABREP78334 AC092552.1-201ENST00000547243 906 ntBASIC15.46■□□□□ 0.07
GABREP78334 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.46■□□□□ 0.07
GABREP78334 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.46■□□□□ 0.07
GABREP78334 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
GABREP78334 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.46■□□□□ 0.07
GABREP78334 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.46■□□□□ 0.07
GABREP78334 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.46■□□□□ 0.06
GABREP78334 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GABREP78334 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
GABREP78334 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
GABREP78334 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
GABREP78334 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.45■□□□□ 0.06
GABREP78334 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.45■□□□□ 0.06
GABREP78334 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.45■□□□□ 0.06
GABREP78334 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.45■□□□□ 0.06
GABREP78334 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
GABREP78334 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.45■□□□□ 0.06
GABREP78334 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.45■□□□□ 0.06
GABREP78334 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.45■□□□□ 0.06
GABREP78334 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.45■□□□□ 0.06
GABREP78334 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.45■□□□□ 0.06
GABREP78334 AC098850.1-201ENST00000419919 790 ntBASIC15.45■□□□□ 0.06
GABREP78334 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.45■□□□□ 0.06
GABREP78334 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
GABREP78334 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
GABREP78334 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.45■□□□□ 0.06
GABREP78334 MIR4525-201ENST00000580000 75 ntBASIC15.45■□□□□ 0.06
GABREP78334 AC061975.2-201ENST00000581722 295 ntBASIC15.45■□□□□ 0.06
GABREP78334 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
GABREP78334 AL606495.2-201ENST00000605867 535 ntBASIC15.45■□□□□ 0.06
GABREP78334 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.45■□□□□ 0.06
GABREP78334 AC012313.1-201ENST00000593393 3059 ntBASIC15.45■□□□□ 0.06
GABREP78334 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
GABREP78334 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
GABREP78334 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
GABREP78334 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
GABREP78334 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
GABREP78334 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 AP001094.4-201ENST00000579008 2176 ntBASIC15.45■□□□□ 0.06
GABREP78334 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GABREP78334 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GABREP78334 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GABREP78334 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
GABREP78334 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GABREP78334 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
GABREP78334 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
GABREP78334 AL139384.1-201ENST00000612143 3047 ntBASIC15.44■□□□□ 0.06
GABREP78334 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GABREP78334 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GABREP78334 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
GABREP78334 REXO1L6P-201ENST00000603433 1515 ntBASIC15.44■□□□□ 0.06
GABREP78334 AL589702.1-201ENST00000641229 1509 ntBASIC15.44■□□□□ 0.06
GABREP78334 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
GABREP78334 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GABREP78334 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GABREP78334 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
GABREP78334 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GABREP78334 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.44■□□□□ 0.06
GABREP78334 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GABREP78334 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
GABREP78334 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.44■□□□□ 0.06
GABREP78334 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.44■□□□□ 0.06
GABREP78334 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.44■□□□□ 0.06
GABREP78334 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.44■□□□□ 0.06
GABREP78334 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.44■□□□□ 0.06
GABREP78334 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GABREP78334 AC119751.2-201ENST00000504529 210 ntBASIC15.44■□□□□ 0.06
GABREP78334 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
GABREP78334 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms