Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
RPL39P62891 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
RPL39P62891 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
RPL39P62891 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.6□□□□□ -0.55
RPL39P62891 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
RPL39P62891 AL596275.1-201ENST00000423464 877 ntBASIC11.6□□□□□ -0.55
RPL39P62891 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.6□□□□□ -0.55
RPL39P62891 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.6□□□□□ -0.55
RPL39P62891 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 MINOS1P3-201ENST00000457048 203 ntBASIC11.6□□□□□ -0.55
RPL39P62891 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
RPL39P62891 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC11.6□□□□□ -0.55
RPL39P62891 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.6□□□□□ -0.55
RPL39P62891 MIR4492-201ENST00000581627 80 ntBASIC11.6□□□□□ -0.55
RPL39P62891 MPDU1-223ENST00000582151 728 ntBASIC11.6□□□□□ -0.55
RPL39P62891 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
RPL39P62891 AC133561.5-201ENST00000635547 218 ntBASIC11.6□□□□□ -0.55
RPL39P62891 TK2-221ENST00000620035 5060 ntTSL 2 BASIC11.6□□□□□ -0.55
RPL39P62891 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC11.6□□□□□ -0.55
RPL39P62891 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
RPL39P62891 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.6□□□□□ -0.55
RPL39P62891 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
RPL39P62891 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC11.6□□□□□ -0.55
RPL39P62891 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.6□□□□□ -0.55
RPL39P62891 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
RPL39P62891 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.59□□□□□ -0.55
RPL39P62891 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.59□□□□□ -0.55
RPL39P62891 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
RPL39P62891 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.59□□□□□ -0.55
RPL39P62891 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
RPL39P62891 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC11.59□□□□□ -0.55
RPL39P62891 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
RPL39P62891 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.59□□□□□ -0.55
RPL39P62891 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.59□□□□□ -0.55
RPL39P62891 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.59□□□□□ -0.55
RPL39P62891 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.59□□□□□ -0.55
RPL39P62891 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
RPL39P62891 MIR648-201ENST00000385046 94 ntBASIC11.59□□□□□ -0.55
RPL39P62891 RCN1P2-201ENST00000398357 915 ntBASIC11.59□□□□□ -0.55
RPL39P62891 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.59□□□□□ -0.55
RPL39P62891 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.59□□□□□ -0.55
RPL39P62891 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.59□□□□□ -0.55
RPL39P62891 NTF6B-201ENST00000591913 560 ntBASIC11.59□□□□□ -0.55
RPL39P62891 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.59□□□□□ -0.55
RPL39P62891 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.59□□□□□ -0.55
RPL39P62891 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.59□□□□□ -0.55
RPL39P62891 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC11.59□□□□□ -0.55
RPL39P62891 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC11.59□□□□□ -0.55
RPL39P62891 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
RPL39P62891 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 SIGLEC16-201ENST00000599858 1437 ntBASIC11.59□□□□□ -0.55
RPL39P62891 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
RPL39P62891 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC11.59□□□□□ -0.55
RPL39P62891 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RPL39P62891 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
RPL39P62891 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
RPL39P62891 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms