Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
CKS1BP61024 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 CD70-202ENST00000423145 881 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS1BP61024 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 HLA-F-220ENST00000434407 884 ntBASIC11.54□□□□□ -0.56
CKS1BP61024 PON3-205ENST00000451904 1053 ntTSL 3 BASIC11.54□□□□□ -0.56
CKS1BP61024 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC11.54□□□□□ -0.56
CKS1BP61024 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS1BP61024 AC124947.2-201ENST00000547118 1133 ntBASIC11.54□□□□□ -0.56
CKS1BP61024 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS1BP61024 AC109462.3-201ENST00000573934 613 ntBASIC11.54□□□□□ -0.56
CKS1BP61024 NAA38-203ENST00000575071 553 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS1BP61024 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS1BP61024 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC11.54□□□□□ -0.56
CKS1BP61024 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CKS1BP61024 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CKS1BP61024 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS1BP61024 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS1BP61024 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CKS1BP61024 AC092053.1-201ENST00000605787 1936 ntBASIC11.54□□□□□ -0.56
CKS1BP61024 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS1BP61024 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS1BP61024 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS1BP61024 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC11.54□□□□□ -0.56
CKS1BP61024 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC11.54□□□□□ -0.56
CKS1BP61024 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS1BP61024 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC11.54□□□□□ -0.56
CKS1BP61024 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS1BP61024 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.53□□□□□ -0.56
CKS1BP61024 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.53□□□□□ -0.56
CKS1BP61024 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CKS1BP61024 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS1BP61024 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS1BP61024 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CKS1BP61024 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.53□□□□□ -0.56
CKS1BP61024 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC11.53□□□□□ -0.56
CKS1BP61024 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.53□□□□□ -0.56
CKS1BP61024 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
CKS1BP61024 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CKS1BP61024 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CKS1BP61024 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
CKS1BP61024 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.53□□□□□ -0.56
CKS1BP61024 STARP1-201ENST00000397973 869 ntBASIC11.53□□□□□ -0.56
CKS1BP61024 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC11.53□□□□□ -0.56
CKS1BP61024 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC11.53□□□□□ -0.56
CKS1BP61024 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC11.53□□□□□ -0.56
CKS1BP61024 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS1BP61024 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 AL138966.2-201ENST00000621997 464 ntBASIC11.53□□□□□ -0.56
CKS1BP61024 TMEM191A-211ENST00000637163 1067 ntBASIC11.53□□□□□ -0.56
CKS1BP61024 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.53□□□□□ -0.56
CKS1BP61024 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
CKS1BP61024 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC11.53□□□□□ -0.56
CKS1BP61024 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
CKS1BP61024 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS1BP61024 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS1BP61024 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms