Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RHBDL3P58872 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.1■□□□□ 0.65
RHBDL3P58872 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RHBDL3P58872 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.1■□□□□ 0.65
RHBDL3P58872 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.1■□□□□ 0.65
RHBDL3P58872 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RHBDL3P58872 RARRES2P5-201ENST00000564013 466 ntBASIC19.1■□□□□ 0.65
RHBDL3P58872 RRP7BP-205ENST00000566851 833 ntBASIC19.1■□□□□ 0.65
RHBDL3P58872 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.1■□□□□ 0.65
RHBDL3P58872 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.1■□□□□ 0.65
RHBDL3P58872 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.1■□□□□ 0.65
RHBDL3P58872 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RHBDL3P58872 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RHBDL3P58872 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RHBDL3P58872 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.1■□□□□ 0.65
RHBDL3P58872 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RHBDL3P58872 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.1■□□□□ 0.65
RHBDL3P58872 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RHBDL3P58872 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RHBDL3P58872 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RHBDL3P58872 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RHBDL3P58872 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.09■□□□□ 0.65
RHBDL3P58872 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RHBDL3P58872 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RHBDL3P58872 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RHBDL3P58872 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
RHBDL3P58872 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.09■□□□□ 0.65
RHBDL3P58872 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RHBDL3P58872 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RHBDL3P58872 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RHBDL3P58872 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
RHBDL3P58872 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.09■□□□□ 0.65
RHBDL3P58872 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RHBDL3P58872 TARDBPP1-201ENST00000442013 1203 ntBASIC19.09■□□□□ 0.65
RHBDL3P58872 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.09■□□□□ 0.65
RHBDL3P58872 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.09■□□□□ 0.65
RHBDL3P58872 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.09■□□□□ 0.65
RHBDL3P58872 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.09■□□□□ 0.65
RHBDL3P58872 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.09■□□□□ 0.65
RHBDL3P58872 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RHBDL3P58872 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RHBDL3P58872 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RHBDL3P58872 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.09■□□□□ 0.65
RHBDL3P58872 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RHBDL3P58872 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RHBDL3P58872 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.09■□□□□ 0.65
RHBDL3P58872 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RHBDL3P58872 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RHBDL3P58872 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.08■□□□□ 0.65
RHBDL3P58872 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RHBDL3P58872 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RHBDL3P58872 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
RHBDL3P58872 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RHBDL3P58872 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RHBDL3P58872 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.08■□□□□ 0.65
RHBDL3P58872 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RHBDL3P58872 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RHBDL3P58872 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RHBDL3P58872 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RHBDL3P58872 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
RHBDL3P58872 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RHBDL3P58872 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.08■□□□□ 0.64
RHBDL3P58872 ARSEP1-201ENST00000420443 635 ntBASIC19.08■□□□□ 0.64
RHBDL3P58872 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.08■□□□□ 0.64
RHBDL3P58872 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.08■□□□□ 0.64
RHBDL3P58872 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.08■□□□□ 0.64
RHBDL3P58872 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.08■□□□□ 0.64
RHBDL3P58872 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.08■□□□□ 0.64
RHBDL3P58872 TIMM17BP1-201ENST00000545713 516 ntBASIC19.08■□□□□ 0.64
RHBDL3P58872 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.08■□□□□ 0.64
RHBDL3P58872 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RHBDL3P58872 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RHBDL3P58872 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.08■□□□□ 0.64
RHBDL3P58872 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.08■□□□□ 0.64
RHBDL3P58872 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.08■□□□□ 0.64
RHBDL3P58872 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RHBDL3P58872 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
RHBDL3P58872 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RHBDL3P58872 AD000864.1-201ENST00000624076 2295 ntBASIC19.08■□□□□ 0.64
RHBDL3P58872 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RHBDL3P58872 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RHBDL3P58872 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RHBDL3P58872 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.08■□□□□ 0.64
RHBDL3P58872 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RHBDL3P58872 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RHBDL3P58872 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.08■□□□□ 0.64
RHBDL3P58872 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.07■□□□□ 0.64
RHBDL3P58872 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RHBDL3P58872 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RHBDL3P58872 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RHBDL3P58872 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.07■□□□□ 0.64
RHBDL3P58872 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RHBDL3P58872 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RHBDL3P58872 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RHBDL3P58872 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RHBDL3P58872 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RHBDL3P58872 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.07■□□□□ 0.64
RHBDL3P58872 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RHBDL3P58872 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RHBDL3P58872 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms